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input files
•
reset
3
votes
6
replies
2.0k
views
The input data for EBseq-HMM
ebseq-hmm
input files
7.6 years ago
natalia.fghf
• 0
5
votes
6
replies
6.8k
views
Importing a .txt file with multiple headers into R
input files
read.table
maxmatch
Mummer
updated 9.1 years ago by
Malcolm Cook
★ 1.6k • written 9.1 years ago by
a.afshinfard
▴ 10
1
vote
4
replies
6.1k
views
ClusterProfiler - How to : input file, groupGo, enrichGo
clusterprofiler
input files
error
help
updated 7.2 years ago by
Guangchuang Yu
★ 1.2k • written 7.2 years ago by
Mataivic
• 0
0
votes
2
replies
1.3k
views
GOstat GO term format "GO:00003567" or "3567" ?
GOstat
format
input files
8.1 years ago
bannistersc
• 0
0
votes
1
reply
1.2k
views
DESeq2 input data contains 0
deseq2
input files
zero
updated 6.8 years ago by
Michael Love
42k • written 6.8 years ago by
yanmin
• 0
1
vote
1
reply
1.8k
views
How can I find the name of the file that a particular R script is missing?
microarray
input files
saccharomyces cerevisiae
bioconductor
updated 9.4 years ago by
Dan Tenenbaum
★ 8.2k • written 9.4 years ago by
Thomas.F.Hahn2
• 0
2
votes
1
reply
1.2k
views
How createSet from reduced "paire-ed" sequencing on MeDIPS?
medips
R
input files
updated 8.3 years ago by
Lukas Chavez
▴ 570 • written 8.3 years ago by
pertille
• 0
0
votes
1
reply
1.1k
views
Help with CRISPRseek inputFilePath
CRISPRseek
input files
updated 7.6 years ago by
Julie Zhu
★ 4.3k • written 7.6 years ago by
bhanson1806
• 0
1
vote
1
reply
1.2k
views
DESeq in DiffBind
Control Usage
input files
updated 7.3 years ago by
Rory Stark
★ 5.2k • written 7.3 years ago by
fusion.slope
▴ 10
0
votes
0
replies
1.2k
views
What is the input for Combat in R?
combat sva
input files
7.2 years ago
arisarkar88
▴ 40
10 results • Page
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Comment: Cannot install oligo on Fedora
by
Guido Hooiveld
★ 4.0k
Thanks for all suggestions and getting to the bottom of this! Unfortunately, fixing C code goes way above my skill level, so I cannot contr…
Comment: Cannot install oligo on Fedora
by
James W. MacDonald
66k
I think the solution is for the C code in `oligo` to be updated to work with more modern versions of `zlib`. The `zlibbioc` package is real…
Comment: Error in gseDO function
by
Guido Hooiveld
★ 4.0k
I don't fully understand what you are asking... Yet, in my opinion it doesn't make sense to use the results of only 12 genes for ORA (nor G…
Comment: Counter-directional LFC shrinkage
by
ATpoint
★ 4.2k
Is this RNA-seq? The unshrunken MA-plot looks very odd and indicates that normalization is completely offset.
Answer: ChAMP not available for bioconductor 3.19
by
shepherl
3.9k
See https://support.bioconductor.org/p/9158324/#9158336 . We have reached out to goseq to fix the package; we have a community member …
Votes
A: DESeq2: add annotations (from data frame) to DESeqDataSet
Answer: Error in gseDO function
Comment: what the test method for enrichGO in clusterProfiler?
A: Comparison between two different group's pathway analysis results
DiffBind Batch Effect
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